GSF - The Genetic Software Forum
Questions and answers about the use of software for genetic analysis
GSF - Phylogenetic Inference
Moderator: brannala
71 topics • Page 1 of 2 • 1, 2
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- why to cite PAUP
by uncia » Mon Sep 17, 2007 1:45 pm - 6 Replies
- 1552 Views
- Last post by vg629911
Mon Feb 02, 2009 5:53 am
- why to cite PAUP
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- Thornian Time Traveller
by Jun G. Inoue » Mon Feb 28, 2005 3:36 am - 1 Replies
- 1563 Views
- Last post by vg629911
Mon Feb 02, 2009 5:51 am
- Thornian Time Traveller
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- Track your computer's activities.
by pinl07 » Wed Jan 07, 2009 7:02 am - 4 Replies
- 156 Views
- Last post by vg629911
Mon Feb 02, 2009 5:49 am
- Track your computer's activities.
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- Track your computer's activities
by pinl07 » Wed Jan 07, 2009 4:11 am - 2 Replies
- 96 Views
- Last post by vg629911
Wed Jan 28, 2009 6:21 am
- Track your computer's activities
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- Paup, scale units??
by mugs » Mon May 21, 2007 11:31 pm - 8 Replies
- 1132 Views
- Last post by vg629911
Sun Jan 25, 2009 9:36 am
- Paup, scale units??
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- node labels in paup
by anne » Wed Feb 07, 2007 4:52 pm - 4 Replies
- 1028 Views
- Last post by vg629911
Wed Jan 21, 2009 5:00 pm
- node labels in paup
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- what's the diffenence between phylogenetic and genealogical
by guo1983752 » Mon Jun 23, 2008 6:00 am - 5 Replies
- 424 Views
- Last post by efgh931
Sat Jan 17, 2009 10:13 pm
- what's the diffenence between phylogenetic and genealogical
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- Schoeniger-von Haeseler 1994. model
by dunght » Sun May 25, 2008 10:00 am - 4 Replies
- 345 Views
- Last post by wowgoldj123
Sat Jan 17, 2009 12:41 am
- Schoeniger-von Haeseler 1994. model
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- FOR HELP
by yings2006cn » Fri Apr 28, 2006 4:14 pm - 2 Replies
- 1228 Views
- Last post by chongzivalve08089
Mon Jan 12, 2009 3:32 pm
- FOR HELP
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- Need Help In PHP
by diptra » Mon Feb 20, 2006 12:12 pm - 2 Replies
- 1163 Views
- Last post by chongzivalve08089
Mon Jan 12, 2009 3:31 pm
- Need Help In PHP
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- Forcing a nucleotide alignment upon an amino acid alignment
by ssandve » Wed Sep 12, 2007 1:16 pm - 3 Replies
- 710 Views
- Last post by vg629911
Sat Jan 10, 2009 1:43 pm
- Forcing a nucleotide alignment upon an amino acid alignment
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- Probeware Evaluations Workshops
by zxcv1987 » Mon Dec 22, 2008 6:25 am - 1 Replies
- 47 Views
- Last post by vg629911
Sat Jan 10, 2009 1:27 pm
- Probeware Evaluations Workshops
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- Track your computer's activities
by pinl07 » Wed Jan 07, 2009 4:00 am - 0 Replies
- 26 Views
- Last post by pinl07
Wed Jan 07, 2009 4:00 am
- Track your computer's activities
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- ILD test taking very long time
by drchinchi » Tue Mar 28, 2006 7:02 pm - 4 Replies
- 1449 Views
- Last post by vg629911
Mon Jan 05, 2009 2:02 pm
- ILD test taking very long time
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- consense problem
by wael » Wed Jun 15, 2005 4:09 pm - 2 Replies
- 1373 Views
- Last post by qrst001
Sun Jan 04, 2009 10:08 pm
- consense problem
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- TiTv ratio under Paup*
by MartinEdwards » Mon Feb 12, 2007 7:12 pm - 2 Replies
- 1032 Views
- Last post by sztin105
Sat Jan 03, 2009 9:25 am
- TiTv ratio under Paup*
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- How to calculate taxon divergence
by fabascal » Mon Nov 21, 2005 6:12 pm - 4 Replies
- 2097 Views
- Last post by fghi660
Tue Dec 30, 2008 3:54 am
- How to calculate taxon divergence
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- Tipdate input file question
by Robles » Mon Jan 16, 2006 9:32 pm - 7 Replies
- 1972 Views
- Last post by fghi660
Tue Dec 30, 2008 3:26 am
- Tipdate input file question
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- Optimizing parameters in rate matrix during ML calculation
by rexkwlau » Thu Dec 07, 2006 12:08 am - 3 Replies
- 1145 Views
- Last post by efgh931
Mon Dec 29, 2008 9:01 pm
- Optimizing parameters in rate matrix during ML calculation
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- protein alignment
by JasonS » Mon Feb 27, 2006 8:02 pm - 5 Replies
- 1864 Views
- Last post by opqr723
Sun Dec 28, 2008 7:43 pm
- protein alignment
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- PAUP and evolutionary rates, etc.
by dektarr » Wed Nov 12, 2008 5:38 pm - 2 Replies
- 165 Views
- Last post by opqr723
Sun Dec 28, 2008 7:41 pm
- PAUP and evolutionary rates, etc.
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- Bootstraping
by THe » Tue Nov 18, 2003 8:43 am - 7 Replies
- 3709 Views
- Last post by opqr723
Wed Dec 24, 2008 2:38 pm
- Bootstraping
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- I couldn't download ClustalX. Somebody could e-mail it me?
by ldevotto » Fri Apr 30, 2004 4:29 pm - 4 Replies
- 2380 Views
- Last post by chongzivalve08089
Wed Dec 17, 2008 6:04 pm
- I couldn't download ClustalX. Somebody could e-mail it me?
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- correlation among characters
by fabascal » Wed Oct 19, 2005 2:54 pm - 1 Replies
- 1322 Views
- Last post by wowgoldj123
Fri Dec 12, 2008 6:50 pm
- correlation among characters
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- Error message in PHYML
by Lupe » Fri Jan 27, 2006 10:34 pm - 4 Replies
- 1688 Views
- Last post by chongzivalve08089
Wed Dec 10, 2008 2:22 am
- Error message in PHYML
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- Problem compiling SD Card Data Logger example
by miaosky » Mon Dec 08, 2008 8:40 am - 0 Replies
- 51 Views
- Last post by miaosky
Mon Dec 08, 2008 8:40 am
- Problem compiling SD Card Data Logger example
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- Bootstrap with STRUCTURE
by helder » Sun Dec 17, 2006 9:59 am - 2 Replies
- 1050 Views
- Last post by chongzivalve08089
Fri Dec 05, 2008 1:13 pm
- Bootstrap with STRUCTURE
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- Question about ModelTest
by nbacl » Fri Jun 13, 2008 3:25 pm - 3 Replies
- 392 Views
- Last post by chongzivalve08089
Fri Dec 05, 2008 1:11 pm
- Question about ModelTest
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- Phy inference using microsatellite loci, arlequin
by maura » Fri Sep 22, 2006 11:01 pm - 4 Replies
- 1526 Views
- Last post by wowgoldj123
Mon Dec 01, 2008 4:48 am
- Phy inference using microsatellite loci, arlequin
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- implementing sequence evolution
by douglasc » Thu Aug 30, 2007 5:52 pm - 4 Replies
- 852 Views
- Last post by wowgoldj123
Mon Dec 01, 2008 4:46 am
- implementing sequence evolution
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- DAMBE: question about saturation plot
by yiannis » Sat Aug 20, 2005 4:10 pm - 10 Replies
- 2670 Views
- Last post by sztin12
Tue Nov 18, 2008 4:27 am
- DAMBE: question about saturation plot
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- Cheap selling shoes,Cartier,Chanel,Handbag,Prada
by forumnike » Thu Nov 13, 2008 5:23 pm - 1 Replies
- 101 Views
- Last post by Hohuyoo931
Thu Nov 13, 2008 9:08 pm
- Cheap selling shoes,Cartier,Chanel,Handbag,Prada
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- Developing new tools for data collection and analysis
by miaosky » Wed Nov 12, 2008 7:48 am - 0 Replies
- 67 Views
- Last post by miaosky
Wed Nov 12, 2008 7:48 am
- Developing new tools for data collection and analysis
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- speeding up bootstrap
by genejockey » Tue Oct 21, 2008 3:14 pm - 1 Replies
- 141 Views
- Last post by rstu127
Sat Oct 25, 2008 7:28 pm
- speeding up bootstrap
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- speeding up bootstrap
by genejockey » Tue Oct 21, 2008 3:56 pm - 0 Replies
- 94 Views
- Last post by genejockey
Tue Oct 21, 2008 3:56 pm
- speeding up bootstrap
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- speeding up bootstrap
by genejockey » Tue Oct 21, 2008 3:12 pm - 0 Replies
- 84 Views
- Last post by genejockey
Tue Oct 21, 2008 3:12 pm
- speeding up bootstrap
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- codeml probability distributions
by sjohri » Sun Jul 30, 2006 8:16 pm - 1 Replies
- 977 Views
- Last post by wowgoldbank
Sat Oct 11, 2008 3:37 am
- codeml probability distributions
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- probability for homogeneity of base frequencies
by dunght » Sun May 25, 2008 10:17 am - 1 Replies
- 290 Views
- Last post by nopq477
Fri Sep 26, 2008 10:44 am
- probability for homogeneity of base frequencies
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- Test of molecular clock in r8s
by Francesc » Fri Jul 18, 2008 7:32 pm - 2 Replies
- 322 Views
- Last post by tytiiiore
Sun Sep 07, 2008 3:09 pm
- Test of molecular clock in r8s
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- Significance of f value and f ratio (PAUP)
by phenics04 » Thu Dec 02, 2004 10:51 pm - 2 Replies
- 2067 Views
- Last post by markalix
Mon Jul 28, 2008 5:31 am
- Significance of f value and f ratio (PAUP)
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- Professional Edition Unlimited BACKGROUND CHECKS on Anyone!
by belard jaydena » Tue Jun 17, 2008 10:03 am - 0 Replies
- 242 Views
- Last post by belard jaydena
Tue Jun 17, 2008 10:03 am
- Professional Edition Unlimited BACKGROUND CHECKS on Anyone!
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- MaxLiklihood and bootstrap
by Cyan1 » Mon Jun 02, 2008 8:13 am - 0 Replies
- 321 Views
- Last post by Cyan1
Mon Jun 02, 2008 8:13 am
- MaxLiklihood and bootstrap
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- Phylogenetic analysis from DNA sequences
by bvujcic » Thu Oct 11, 2007 7:08 pm - 3 Replies
- 840 Views
- Last post by Babysittah
Mon Dec 10, 2007 6:07 am
- Phylogenetic analysis from DNA sequences
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- creating a dendrogramme
by ibtisss » Tue Sep 27, 2005 9:27 am - 1 Replies
- 1374 Views
- Last post by vincenzoL
Sat Nov 24, 2007 11:30 am
- creating a dendrogramme
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- saving a consensus tree with bootstrap values for Treeview?
by isen » Wed Jun 20, 2007 2:18 pm - 1 Replies
- 897 Views
- Last post by uncia
Mon Sep 17, 2007 1:35 pm
- saving a consensus tree with bootstrap values for Treeview?
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- Transition/transversion ratio for distance analysis in PAUP
by uncia » Mon Jul 23, 2007 10:24 am - 2 Replies
- 971 Views
- Last post by uncia
Mon Sep 17, 2007 1:25 pm
- Transition/transversion ratio for distance analysis in PAUP
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- Please help me with BEAST!
by timtim86 » Sun Apr 29, 2007 2:21 pm - 0 Replies
- 945 Views
- Last post by timtim86
Sun Apr 29, 2007 2:21 pm
- Please help me with BEAST!
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- Bootstrapping in PAUP
by goettingen » Mon Dec 04, 2006 4:58 pm - 0 Replies
- 1041 Views
- Last post by goettingen
Mon Dec 04, 2006 4:58 pm
- Bootstrapping in PAUP
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- Display PAUP commands in the output buffer
by jules » Tue Jun 20, 2006 1:20 pm - 0 Replies
- 1095 Views
- Last post by jules
Tue Jun 20, 2006 1:20 pm
- Display PAUP commands in the output buffer
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- Create a consensus tree with bootstrap values in Paup
by Mark » Wed Jan 18, 2006 2:24 pm - 1 Replies
- 1715 Views
- Last post by sergio
Fri Mar 03, 2006 7:09 pm
- Create a consensus tree with bootstrap values in Paup
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